OK, I hate to say it but, because it's too late now. But you should not have parked it half full in the first place. Due to condensation that will build up in the tank you are most likely going to have a lot of issues.
Now to address the current issue, it's time to do a hand over hand inspection of the filling lines going to the tank. As others have said, do you have dual fillers and if so can you fill from the other side without issue? If so then you are in luck. No matte what you've got your work cut out for you. Look for collapses in the lines and soft spots in the hoses. Also you may want to grab your self a flexible (fiberglass) wire snake or something similar to push into the various hoses leading to the tank to see if there is some sort of physical blockage. The only problem doing this you may dislodge it and push it into the tank, which in turn will clog the pump and filter. So you may see where I'm going here. You may want to disconnect the end of the hoses closest to the tank and then snake the lines.
Basically you may get lucky or be in a world of hurt here. Good Luck